Publications of the Laboratory of Microbiology

Researchers of the Laboratory of Microbiology publish on a regular basis in scientific journals, professional journals, scientific and popular books, and proceedings.

Our publications

Mucin and human milk oligosaccharides utilization: a strategy of Akkermansia muciniphila to ensure survival in the human gut

Kostopoulos, Ioannis (2021) Wageningen University. Promotor(en): J. Knol, co-promotor(en): C. Belzer. - Wageningen : Wageningen University - ISBN 9789463955522 - p.
Correction: Roadmap for naming uncultivated Archaea and Bacteria

Murray, Alison E. , Freudenstein, John , Gribaldo, Simonetta , Hatzenpichler, Roland , Hugenholtz, Philip , Kämpfer, Peter , Konstantinidis, Konstantinos T. , Lane, Christopher E. , Papke, R.T. , Parks, Donovan H. , Rossello-Mora, Ramon , Stott, Matthew B. , Sutcliffe, Iain C. , Thrash, J.C. , Venter, Stephanus N. , Whitman, William B. , Acinas, Silvia G. , Amann, Rudolf I. , Anantharaman, Karthik , Armengaud, Jean , Baker, Brett J. , Barco, Roman A. , Bode, Helge B. , Boyd, Eric S. , Brady, Carrie L. , Carini, Paul , Chain, Patrick S.G. , Colman, Daniel R. , DeAngelis, Kristen M. , Rios, Maria Asuncion de los , Estrada-de los Santos, Paulina , Dunlap, Christopher A. , Eisen, Jonathan A. , Emerson, David , Ettema, Thijs J.G. , Eveillard, Damien , Girguis, Peter R. , Hentschel, Ute , Hollibaugh, James T. , Hug, Laura A. , Inskeep, William P. , Ivanova, Elena P. , Klenk, Hans Peter , Li, Wen Jun , Lloyd, Karen G. , Löffler, Frank E. , Makhalanyane, Thulani P. , Moser, Duane P. , Nunoura, Takuro , Palmer, Marike , Parro, Victor , Pedrós-Alió, Carlos , Probst, Alexander J. , Smits, Theo H.M. , Steen, Andrew D. , Steenkamp, Emma T. , Spang, Anja , Stewart, Frank J. , Tiedje, James M. , Vandamme, Peter , Wagner, Michael , Wang, Feng Ping , Yarza, Pablo , Hedlund, Brian P. , Reysenbach, Anna Louise (2021) Nature Microbiology 6 (2021). - ISSN 2058-5276
Special issue “Anaerobes in biogeochemical cycles”

Plugge, Caroline M. , Sousa, Diana Z. (2020) Microorganisms 9 (2020)1. - ISSN 2076-2607 - p. 1 - 2.
Study title: Comparative genomic analysis of Flavobacteriaceae : insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis

Gavriilidou, Asimenia , Gutleben, Johanna , Versluis, Dennis , Forgiarini, Francesca , Passel, Mark W.J. van , Ingham, Colin J. , Smidt, Hauke , Sipkema, Detmer (2020) Wageningen : Wageningen University & Research
Comparative genomic analysis of Flavobacteriaceae: insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis

Gavriilidou, Asimenia , Gutleben, Johanna , Versluis, Dennis , Forgiarini, Francesca , Passel, Mark van , Ingham, Colin J. , Smidt, Hauke , Sipkema, Detmer (2020) : Wageningen University & Research
Genome sequencing of Marine Flavobacteriaceae isolated from sponges

Gavriilidou, Asimenia , Gutleben, Johanna , Versluis, Dennis , Forgiarini, Francesca , Passel, Mark van , Ingham, Colin J. , Smidt, Hauke , Sipkema, Detmer (2020) : Wageningen University
Roadmap to functional characterization of the human intestinal microbiota in its interaction with the host

Kolmeder, Carolin A. , Vos, Willem M. de (2020) Journal of Pharmaceutical and Biomedical Analysis 194 (2020). - ISSN 0731-7085
In search of sulfate-reducing consortia able to degrade acetate under acidic conditions

Campos-Quevedo, Nohemi G. , Sánchez-Andrea, Irene , López-Lozano, Nguyen E. , Stams, Alfons J.M. , Celis, Lourdes B. (2020) Journal of Chemical Technology and Biotechnology (2020). - ISSN 0268-2575
Gut Microbiota of Young Children Living in Four Brazilian Cities

Chew, Charmaine , Barros, Karina Vieira , Weffort, Virginia Resende Silva , Sousa Maranhão, Hélcio de , Laranjeira, Marisa , Knol, Jan , Roeselers, Guus , Morais, Mauro Batista de (2020) Frontiers in Pediatrics 8 (2020). - ISSN 2296-2360
Synthetic Sequencing Standards : A Guide to Database Choice for Rumen Microbiota Amplicon Sequencing Analysis

Smith, Paul E. , Waters, Sinead M. , Gómez Expósito, Ruth , Smidt, Hauke , Carberry, Ciara A. , McCabe, Matthew S. (2020) Frontiers in Microbiology 11 (2020). - ISSN 1664-302X

Publications of the Laboratory of Microbiology

Our publications

Mucin and human milk oligosaccharides utilization: a strategy of Akkermansia muciniphila to ensure survival in the human gut

Correction: Roadmap for naming uncultivated Archaea and Bacteria

Special issue “Anaerobes in biogeochemical cycles”

Study title: Comparative genomic analysis of Flavobacteriaceae : insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis

Comparative genomic analysis of Flavobacteriaceae: insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis

Genome sequencing of Marine Flavobacteriaceae isolated from sponges

Roadmap to functional characterization of the human intestinal microbiota in its interaction with the host

In search of sulfate-reducing consortia able to degrade acetate under acidic conditions

Gut Microbiota of Young Children Living in Four Brazilian Cities

Synthetic Sequencing Standards : A Guide to Database Choice for Rumen Microbiota Amplicon Sequencing Analysis

Mucin and human milk oligosaccharides utilization: a strategy of Akkermansia muciniphila to ensure survival in the human gut

Modulating the human intestinal microbiome in healthy adults and elderly through dietary supplements

Structure-function relations of RNA molecules involved in gene expression and host defence

Algae-associated bacteria in photobioreactors

Racing-red chassis : Advancing Rhodobacter sphaeroides as platform for isoprenoid production