Integration of -omics data
...under construction...
Research Projects
...under construction...
Publications
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Genome-wide characterization of Phytophthora infestans metabolism : a systems biology approach
Molecular Plant Pathology 19 (2018)6. - ISSN 1464-6722 - p. 1403 - 1413.
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Single-molecule protein sequencing through fingerprinting: computational assessment
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Exploiting next-generation sequencing to solve the haplotyping puzzle in polyploids: a simulation study
Briefings in Bioinformatics 19 (2018)3. - ISSN 1467-5463 - p. 387 - 403.
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Whole-genome amplification (WGA) create specific chimeric fragments, which consist mainly of palindrome sequences. We developed the tool Pacasus to detect and correct these palindromic sequences in long reads, for example from PacBio and Nanopore
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Correcting palindromes in long reads after whole-genome amplification
bioRxiv (2017). - 22 p.
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Genomics of adaptation depends on the rate of environmental change in experimental yeast populations
Molecular Biology and Evolution 34 (2017)10. - ISSN 0737-4038 - p. 2613 - 2626.
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A survey of deleterious variants in highly managed commercial layer lines
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Survey of deleterious variants in highly managed commercial layer lines
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Distribution, position, and genomic characteristics of crossovers in tomato recombinant inbred lines derived from an interspecific cross between S. lycopersicum and S. pimpinellifolium
The Plant Journal 89 (2017)3. - ISSN 0960-7412 - p. 554 - 564.
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Predicting Impact of Variation in Livestock