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Genomics of specialized metabolism

Genomics of specialized metabolism

Publications

NPLinker: Natural Product Linker

Crocioni, Giulia , Geng, Cunliang , Lien, A. , Torres Ortega, L.R. , Medeiros Ferreira, D.F. , Hecht, Helge , Medema, M.H. , van der Hooft, J.J.J. (2025)
Exploring the Interspecific Interactions and the Metabolome of the Soil Isolate Hylemonella gracilis

Tyc, Olaf , Kulkarni, Purva , Ossowicki, Adam , Tracanna, V. , Medema, M.H. , van Baarlen, P. , van IJcken, W.F.J. , Verhoeven, Koen J.F. , Garbeva, Paolina (2023) mSystems (2023), Volume: 8, Issue: 1 - ISSN 2379-5077
iPRESTO: integrated Prediction and Rigorous Exploration of biosynthetic Sub-clusters Tool

Louwen, J.J.R. , Kautsar, S.A. , van der Burg, S. , Medema, M.H. , van der Hooft, J.J.J. (2022) Wageningen: Wageningen University & Research
TbasCO: trait-based comparative ‘omics identifies ecosystem-level and niche-differentiating adaptations of an engineered microbiome

McDaniel, E.A. , van Steenbrugge, J.J.M. , Noguera, D.R. , McMahon, K.D. , Raaijmakers, J.M. , Medema, M.H. , Oyserman, B. (2022) ISME Communications (2022), Volume: 2 - ISSN 2730-6151
NPLinker

Geng, Cunliang , Crocioni, Giulia , Rogers, Simon , Ramsay, Andrew , Duncan, Katherine , van der Hooft, J.J.J. , Hjörleifsson, Grímur , Soldatou, Sylvia , Huber, Florian , Wandy, Joe , Daly, Ronan , Louwen, J.J.R. , Medema, M.H. (2021)
Correction to: Animals in Our Midst : The Challenges of Co-existing with Animals in the Anthropocene

Bovenkerk, Bernice , Keulartz, Jozef (2021) In: Animals in Our Midst - Springer - ISBN: 9783030635220
Activated Sludge Bioreactor MAGs

McDaniel, E.A. , van Steenbrugge, J.J.M. , Noguera, D.R. , McMahon, K.D. , Raaijmakers, J.M. , Medema, M.H. , Oyserman, B. (2021)
A biaryl-linked tripeptide from Planomonospora reveals a widespread class of minimal RiPP gene clusters

Zdouc, Mitja M. , Alanjary, M.M. , Zarazúa, Guadelupe S. , Maffioli, Sonia I. , Crüsemann, M. , Medema, M.H. , Donadio, Stefano , Sosio, Margherita (2021) Cell Chemical Biology (2021), Volume: 28, Issue: 5 - ISSN 2451-9456 - p. 733-739.e4.
Microbial natural product databases: moving forward in the multi-omics era

Van Santen, Jeffrey A. , Kautsar, S.A. , Medema, M.H. , Linington, Roger G. (2021) Natural Product Reports (2021), Volume: 38, Issue: 1 - ISSN 0265-0568 - p. 264-278.
Correction to: Soil erosion as a resilience drain in disturbed tropical forests

Flores, Bernardo M. , Staal, Arie , Jakovac, Catarina C. , Hirota, Marina , Holmgren, Milena , Oliveira, Rafael S. (2020) Plant and Soil (2020), Volume: 450, Issue: 27 - ISSN 0032-079X

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