
Breeding for quality
Consumer quality traits, such as flavour, nutritional value, colour and firmness are becoming increasingly important in current plant breeding programs. Advances in X-omics technologies make it possible to study these complex, multifactorial traits. The Breeding for Quality group aims to elucidate the genetic and molecular basis underlying these fruit quality traits, using genetic, genomic and metabolomics approaches.
Research is carried out in a multi-disciplinary setting, in close collaboration with research groups specialised in sensory analyses, human nutrition, metabolomics and statistics. In addition there is a longstanding collaboration with several breeding companies.
Our research approach
Our research mainly focusses on elucidating the molecular genetic and biochemical basis of flavour and health-related metabolic pathways in tomato and pepper. In general we use two complementary approaches:
- a genetic approach including utilisation of (exotic) germplasm collections, development of breeding populations and extensive geno- and phenotyping to identify QTLs underlying flavour attributes and health-related compounds and
- a functional genomics/metabolomics approach to elucidate the biochemical pathways and key genes underlying specific flavour-related volatiles and health-related metabolites. Highlights of our research include a detailed insight in the genetic loci and metabolic pathways relevant for tomato fruit flavour and the elucidation of a novel mechanism to determine the release of flavour-related volatiles through differential glyco-conjugation of their immediate precursors.
Focus on genetic strategies
Future focus is geared towards the design of (molecular) genetic strategies and the development of breeding (half) materials to solve four major problems/needs:
- to maintain a good fruit quality throughout the post-harvest production chain in order to prevent or limit food waste,
- to maintain quality at increased production and yield,
- to achieve good quality fruits under sub-optimal growing conditions and
- to develop specialised food products for specific consumer groups (personalised nutrition).
Publications
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P0165 A highly miniaturized ingestible sensor for measuring gut health along the GI tract
Journal of Crohn's and Colitis (2025), Volume: 19, Issue: Supplement_1 - ISSN 1873-9946 - p. i561-i561. -
Key gene discovered to turn bitter tomatoes into sweet ones
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The Quest for the Sli Locus
Potato Research (2024) - ISSN 0014-3065 -
The genetic architecture of the pepper metabolome and the biosynthesis of its signature capsianoside metabolites
Current biology : CB (2024), Volume: 34, Issue: 18 - ISSN 0960-9822 - p. 4209-4223. -
CaMYB12-like underlies a major QTL for flavonoid content in pepper (Capsicum annuum) fruit
New Phytologist (2023), Volume: 237, Issue: 6 - ISSN 0028-646X - p. 2255-2267. -
Analysis of >3400 worldwide eggplant accessions reveals two independent domestication events and multiple migration-diversification routes
Plant Journal (2023), Volume: 116, Issue: 6 - ISSN 0960-7412 - p. 1667-1680. -
Exploration of high-throughput data for heat tolerance selection in Capsicum annuum
Plant Phenome Journal (2023), Volume: 6, Issue: 1 - ISSN 2578-2703 -
Genetics and breeding of phenolic content in tomato, eggplant and pepper fruits
Frontiers in Plant Science (2023), Volume: 14 - ISSN 1664-462X -
Identification of candidate genes associated with less-photosensitive anthocyanin phenotype using an EMS mutant (pind) in eggplant (Solanum melongena L.)
Frontiers in Plant Science (2023), Volume: 14 - ISSN 1664-462X -
G2P-SOL: In search of the perfect pepper
Staff
Researchers
Research assistants
PhD candidates
- Ying Liu
- Yi Wu