Complex Microbial Ecosystems & Marine Microbiology
Research and education within the Microbial Ecology Group aims to understand and explore the functioning of microorganisms in natural and man-made ecosystems, including interdependencies with their living and non-living environments.
Key research issues include:
- Microbiota associated with body surfaces (gut, skin, mouth) in humans, livestock, rodent-animal models, companion animals and wildlife
- Microbial communities in environmental biotechnology
- Microbes and their cellular biomarkers as proxies for ecosystem life history and environmental change, embracing a OneHealth perspective
Activities focus on innovative cultivation-based and molecular approaches aimed at understanding microbial composition and functionality at the system level, including the application of next-generation sequencing.
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Research themes
Microbial and Synthetic Genetics & Metabolism
We study thermophilic bacteria and archaea, from their metabolism to CRISPR-Cas which defends them against viruses. In addition, we develop genome editing tools and optimise protein expression.
Microbial Evolution & Genome evolution and Dynamics in Eukaryotes
Within this theme, we focus on exploring and characterizing the microbial diversity that exists on our planet and how this diversity came about.
(Anaerobic) Microbial Physiology, Eukaryotes and interactions
To help create a sustainable circular economy, we investigate the physiology of the anaerobic microorganisms.
Complex Microbial Ecosystems & Marine Microbiology
Research and education within the Microbial Ecology Group aims to understand and explore the functioning of microorganisms in natural and man-made ecosystems, including interdependencies with their living and non-living environments.
Microbiome, Lumen & Diet, Mucus & Milk
Our research and education focus on ecological concepts of the intestinal microbiome in relation to diet and health.
Microbiology
The Laboratory of Microbiology, led by Thijs Ettema, engages in research and education focusing on fundamental and applied aspects of the diversity, physiology, ecology and evolution of microorganisms and their viruses.